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Creators/Authors contains: "Lee, Eric"

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  1. Free, publicly-accessible full text available December 1, 2026
  2. Heavy-atom-free photosensitizers (HAF-PSs) have emerged as a new class of photosensitizers aiming to broaden their applicability and versatility across various fields of the photodynamic therapy of cancers. The strategy involves replacing the exocyclic oxygen atoms of the carbonyl groups of established biocompatible organic fluorophores with sulfur, thereby bathochromically shifting their absorption spectra and enhancing their intersystem crossing efficiencies. Despite these advancements, the photophysical attributes and electronic relaxation mechanisms of many of these HAF-PSs remain inadequately elucidated. In this study, we investigate the excited state dynamics and photochemical properties of two promising HAF-PSs, thio-coumarin and thio-acridone. Employing a combination of steady-state and time-resolved techniques from femtoseconds to microseconds, coupled with quantum chemical calculations, we unravel the electronic relaxation mechanisms that give rise to the efficient population of long-lived and reactive triplet states in these HAF-PSs. 
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    Free, publicly-accessible full text available November 27, 2025
  3. Systematic reviews (SRs) are a crucial component of evidence-based clinical practice. Unfortunately, SRs are labor-intensive and unscalable with the exponential growth in literature. Automating evidence synthesis using machine learning models has been proposed but solely focuses on the text and ignores additional features like citation information. Recent work demonstrated that citation embeddings can outperform the text itself, suggesting that better network representation may expedite SRs. Yet, how to utilize the rich information in heterogeneous information networks (HIN) for network embeddings is understudied. Existing HIN models fail to produce a high-quality embedding compared to simply running state-of-the-art homogeneous network models. To address existing HIN model limitations, we propose SR-CoMbEr, a community-based multi-view graph convolutional network for learning better embeddings for evidence synthesis. Our model automatically discovers article communities to learn robust embeddings that simultaneously encapsulate the rich semantics in HINs. We demonstrate the effectiveness of our model to automate 15 SRs. 
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  4. null (Ed.)
  5. Waves of miseryis a phenomenon where spikes of many node splits occur over short periods of time in tree indexes. Waves of misery negatively affect the performance of tree indexes in insertion-heavy workloads. Waves of misery have been first observed in the context of the B-tree, where these waves cause unpredictable index performance. In particular, the performance of search and index-update operations deteriorate when a wave of misery takes place, but is more predictable between the waves. This paper investigates the presence or lack of waves of misery in several R-tree variants, and studies the extent of which these waves impact the performance of each variant. Interestingly, although having poorer query performance, the Linear and Quadratic R-trees are found to be more resilient to waves of misery than both the Hilbert and R*-trees. This paper presents several techniques to reduce the impact in performance of the waves of misery for the Hilbert and R*-trees. One way to eliminate waves of misery is to force node splits to take place at regular times before nodes become full to achieve deterministic performance. The other way is that upon splitting a node, do not split it evenly but rather at different node utilization factors. This allows leaf nodes not to fill at the same pace. We study the impact of two new techniques to mitigate waves of misery after the tree index has been constructed, namely Regular Elective Splits (RES, for short) and Unequal Random Splits (URS, for short). Our experimental investigation highlights the trade-offs in performance of the introduced techniques and the pros and cons of each technique. 
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